Brara.H02647.1

Description : subgroup ERF-III transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H02647.1
Cluster	HCAA Clusters: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method
At3g60490	No alias	Ethylene-responsive transcription factor ERF035...	0.04	Orthogroups_2024-Update
Bradi1g17961	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Bradi1g71740	No alias	Integrase-type DNA-binding superfamily protein	0.06	Orthogroups_2024-Update
Bradi4g31040	No alias	related to AP2 2	0.02	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Brara.I00528.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.01	Orthogroups_2024-Update
Glyma.03G162400	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Glyma.07G055000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.07G250100	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Glyma.17G124100	No alias	related to AP2 11	0.01	Orthogroups_2024-Update
Glyma.20G168500	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
HORVU4Hr1G071890.2	No alias	subgroup ERF-I transcription factor	0.01	Orthogroups_2024-Update
Potri.003G050700	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.006G069400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Sobic.001G531100.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	29	79

External Links

No external refs found!

Brara.H02647.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation