Brara.H02650.1


Description : Unknown function


Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02650.1
Cluster HCAA Clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
A4A49_11395 No alias protein hothead 0.03 Orthogroups_2024-Update
At1g73050 No alias (R)-mandelonitrile lyase-like... 0.06 Orthogroups_2024-Update
Glyma.07G009900 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Glyma.20G154800 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G022360.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g19930 No alias HOTHEAD precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_101730g0010 No alias (at5g51950 : 159.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00032973-RA No alias (at1g12570 : 369.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00048296-RA No alias (at1g14190 : 439.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
Potri.001G111500 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Orthogroups_2024-Update
Potri.010G168100 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Potri.010G168200 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Solyc03g121600 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.05 Orthogroups_2024-Update
Solyc06g035580 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.03 Orthogroups_2024-Update
Sopen06g022090 No alias GMC oxidoreductase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 46 319
IPR007867 GMC_OxRtase_C 407 556
No external refs found!