At2g28350


Description : Auxin response factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV66]


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g28350
Cluster HCCA clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
A4A49_20678 No alias auxin response factor 1 0.05 Orthogroups_2024-Update
Bradi3g04920 No alias auxin response factor 6 0.03 Orthogroups_2024-Update
GRMZM2G017187 No alias auxin response factor 1 0.03 Orthogroups_2024-Update
GRMZM2G086949 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
GRMZM5G874163 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
Glyma.01G103500 No alias auxin response factor 9 0.03 Orthogroups_2024-Update
Glyma.03G070500 No alias auxin response factor 9 0.04 Orthogroups_2024-Update
Glyma.18G184500 No alias auxin response factor 9 0.05 Orthogroups_2024-Update
HORVU2Hr1G121110.32 No alias ARF-type transcription factor 0.06 Orthogroups_2024-Update
MA_40335g0010 No alias (at5g62000 : 752.0) Encodes an auxin response factor.... 0.03 Orthogroups_2024-Update
PSME_00020341-RA No alias (at1g19220 : 630.0) Encodes an auxin response factor... 0.03 Orthogroups_2024-Update
Potri.006G138500 No alias Transcriptional factor B3 family protein /... 0.05 Orthogroups_2024-Update
Potri.018G063000 No alias auxin response factor 19 0.03 Orthogroups_2024-Update
Sobic.003G298600.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Sopen09g002650 No alias Auxin response factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0009725 response to hormone IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0001505 regulation of neurotransmitter levels IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006544 glycine metabolic process IEP Predicted GO
BP GO:0006546 glycine catabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009071 serine family amino acid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0042133 neurotransmitter metabolic process IEP Predicted GO
BP GO:0042135 neurotransmitter catabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 115 216
IPR010525 Auxin_resp 278 360
No external refs found!