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  5. Brara.H02844.1

Brara.H02844.1


Description : non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex


Gene families : OG_42_0002113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02844.1
Cluster HCAA Clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62720 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.02 Orthogroups_2024-Update
Bradi2g10278 No alias CLP protease R subunit 4 0.04 Orthogroups_2024-Update
Glyma.03G235800 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.03 Orthogroups_2024-Update
LOC_Os03g22430 No alias OsClp5 - Putative Clp protease homologue, expressed 0.03 Orthogroups_2024-Update
Seita.5G044900.1 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.05 Orthogroups_2024-Update
Seita.9G407400.1 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 Orthogroups_2024-Update
Sobic.003G128400.1 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 Orthogroups_2024-Update
Solyc01g099690 No alias ATP-dependent Clp protease proteolytic subunit (AHRD... 0.04 Orthogroups_2024-Update
evm.model.tig00020952.49 No alias (at4g17040 : 138.0) CLP protease R subunit 4 (CLPR4);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004725 protein tyrosine phosphatase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 114 294
No external refs found!