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  5. Brara.H02846.1

Brara.H02846.1


Description : histone demethylase *(KDM3) & auxiliary component *(JMJ24) of COMPASS histone trimethylation complex


Gene families : OG_42_0000491 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02846.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G005010.1 No alias histone demethylase *(KDM3) 0.04 Orthogroups_2024-Update
Mp5g16950.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 Orthogroups_2024-Update
PSME_00027154-RA No alias (at4g00990 : 676.0) Transcription factor jumonji (jmjC)... 0.04 Orthogroups_2024-Update
Pp1s430_29V6 No alias transcription factor jumonjidomain-containing protein 0.02 Orthogroups_2024-Update
Pp1s444_19V6 No alias jmjc domain containing expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
MF GO:0009922 fatty acid elongase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR014977 WRC_dom 25 65
IPR003347 JmjC_dom 710 815
IPR018866 Znf-4CXXC_R1 201 268
No external refs found!