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  5. Brara.H02856.1

Brara.H02856.1


Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG_42_0000404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02856.1
Cluster HCAA Clusters: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
Bradi5g17900 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.02 Orthogroups_2024-Update
Brara.F00558.1 No alias contact site protein (VAP27) of... 0.03 Orthogroups_2024-Update
Potri.014G059500 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.03 Orthogroups_2024-Update
Seita.6G058400.1 No alias contact site protein (VAP27) of... 0.01 Orthogroups_2024-Update
Sobic.006G160200.1 No alias contact site protein (VAP27) of... 0.03 Orthogroups_2024-Update
Solyc08g007390 No alias No description available 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 109
No external refs found!