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  5. Brara.H02942.1

Brara.H02942.1


Description : CMF transcription factor


Gene families : OG_42_0000843 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000843_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02942.1
Cluster HCAA Clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
At1g07050 No alias CCT motif family protein [Source:TAIR;Acc:AT1G07050] 0.05 Orthogroups_2024-Update
Glyma.10G274300 No alias B-box type zinc finger protein with CCT domain 0.03 Orthogroups_2024-Update
Glyma.14G197900 No alias CCT motif family protein 0.03 Orthogroups_2024-Update
Glyma.20G115600 No alias B-box type zinc finger protein with CCT domain 0.03 Orthogroups_2024-Update
Kfl00212_0040 kfl00212_0040_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.015G054600 No alias B-box type zinc finger protein with CCT domain 0.03 Orthogroups_2024-Update
Pp1s112_154V6 No alias zinc finger protein constans-like 16 0.03 Orthogroups_2024-Update
Seita.1G308800.1 No alias BBX class-III transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 152 194
No external refs found!