Brara.H02960.1

Description : protease *(FtsH2/8) & EXECUTER-cleavage protease *(FtsH2) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes

Gene families : OG_42_0001288 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H02960.1
Cluster	HCAA Clusters: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method
139726	No alias	FtsH extracellular protease family	0.03	Orthogroups_2024-Update
149856	No alias	FtsH extracellular protease family	0.04	Orthogroups_2024-Update
At1g06430	No alias	ATP-dependent zinc metalloprotease FTSH 8, chloroplastic...	0.05	Orthogroups_2024-Update
At5g15250	No alias	ATP-dependent zinc metalloprotease FTSH 6, chloroplastic...	0.04	Orthogroups_2024-Update
Bradi1g29900	No alias	FtsH extracellular protease family	0.02	Orthogroups_2024-Update
GRMZM2G087598	No alias	FtsH extracellular protease family	0.03	Orthogroups_2024-Update
Glyma.04G019100	No alias	FtsH extracellular protease family	0.03	Orthogroups_2024-Update
Glyma.08G086600	No alias	FtsH extracellular protease family	0.03	Orthogroups_2024-Update
LOC_Os06g12370	No alias	OsFtsH6 FtsH protease, homologue of AtFtsH6, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g45820	No alias	OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed	0.05	Orthogroups_2024-Update
Mp4g19200.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.03	Orthogroups_2024-Update
PSME_00055410-RA	No alias	(at2g30950 : 502.0) Metalloprotease that functions in...	0.02	Orthogroups_2024-Update
Pp1s10_192V6	No alias	precursor of protein cell division protease ftsh-like protein	0.02	Orthogroups_2024-Update
Pp1s156_30V6	No alias	cell division protein	0.02	Orthogroups_2024-Update
Pp1s44_78V6	No alias	cell division protein 2	0.02	Orthogroups_2024-Update
Pp1s9_115V6	No alias	cell division protein	0.04	Orthogroups_2024-Update
Seita.4G099200.1	No alias	EXECUTER-cleavage protease *(FtsH2) & protease...	0.03	Orthogroups_2024-Update
Seita.4G285900.1	No alias	protease (FtsH1/5) & component (FtsH1/2/5/6/8) of FtsH...	0.02	Orthogroups_2024-Update
Solyc02g081550	No alias	LeftsH6FtsH protease	0.05	Orthogroups_2024-Update
Sopen07g026900	No alias	Peptidase family M41	0.05	Orthogroups_2024-Update
evm.model.contig_522.1	No alias	(q9bae0\|ftsh_medsa : 654.0) Cell division protease ftsH...	0.02	Orthogroups_2024-Update
evm.model.tig00000704.23	No alias	(at1g50250 : 325.0) encodes an FTSH protease that is...	0.01	Orthogroups_2024-Update
evm.model.tig00021127.121	No alias	(at5g42270 : 463.0) VAR1 contains a conserved motif for...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	16Dec
MF	GO:0004222	metalloendopeptidase activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
BP	GO:0006508	proteolysis	IEA	16Dec
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003883	CTP synthase activity	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004506	squalene monooxygenase activity	IEP	Predicted GO
MF	GO:0004602	glutathione peroxidase activity	IEP	Predicted GO
MF	GO:0005102	signaling receptor binding	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Predicted GO
MF	GO:0008083	growth factor activity	IEP	Predicted GO
BP	GO:0008283	cell proliferation	IEP	Predicted GO
BP	GO:0009116	nucleoside metabolic process	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0030151	molybdenum ion binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
MF	GO:0030545	receptor regulator activity	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0042278	purine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0048018	receptor ligand activity	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	272	403
IPR000642	Peptidase_M41	486	674

External Links

No external refs found!

Brara.H02960.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation