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  5. Brara.H02976.1

Brara.H02976.1


Description : BBX class-IV transcription factor


Gene families : OG_42_0004508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02976.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
271535 No alias light-regulated zinc finger protein 1 0.04 Orthogroups_2024-Update
At1g06040 No alias B-box zinc finger protein 24... 0.08 Orthogroups_2024-Update
Bradi3g48180 No alias salt tolerance homologue 0.04 Orthogroups_2024-Update
Brara.D01911.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Brara.I05427.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Glyma.11G127100 No alias B-box zinc finger family protein 0.06 Orthogroups_2024-Update
Glyma.12G051700 No alias B-box zinc finger family protein 0.06 Orthogroups_2024-Update
Glyma.15G029500 No alias B-box zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G085000.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os02g39360 No alias B-box zinc finger family protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.017G028300 No alias B-box zinc finger family protein 0.03 Orthogroups_2024-Update
Pp1s509_13V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.1G225000.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Seita.7G149800.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G208400.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G131800.1 No alias BBX class-IV transcription factor 0.07 Orthogroups_2024-Update
Solyc06g073180 No alias CONSTANS interacting protein 1 0.03 Orthogroups_2024-Update
Sopen06g029550 No alias B-box zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 55 96
No external refs found!