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  5. Brara.H02982.1

Brara.H02982.1


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02982.1
Cluster HCAA Clusters: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
At1g05890 No alias RBR-type E3 ubiquitin transferase... 0.03 Orthogroups_2024-Update
Bradi1g14430 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G343300 No alias IBR domain-containing protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G055260.4 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Pp1s102_135V6 No alias protein ariadne- 0.03 Orthogroups_2024-Update
Pp1s156_28V6 No alias protein ariadne- 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 289 336
IPR002867 IBR_dom 209 271
No external refs found!