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  5. Brara.H03012.1

Brara.H03012.1


Description : chromatin remodeling factor *(Rad5-like)


Gene families : OG_42_0001642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H03012.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Solyc07g052100 No alias SNF2 domain-containing protein (AHRD V3.3 *** D7KEB6_ARALL) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
InterPro domains Description Start Stop
IPR000330 SNF2_N 158 560
IPR018957 Znf_C3HC4_RING-type 582 621
IPR001650 Helicase_C 666 780
No external refs found!