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  5. Brara.H03042.1

Brara.H03042.1


Description : class XI myosin microfilament-based motor protein


Gene families : OG_42_0000130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H03042.1
Cluster HCAA Clusters: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
At3g19960 No alias Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9] 0.03 Orthogroups_2024-Update
Brara.A03090.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G409343 No alias Myosin family protein with Dil domain 0.03 Orthogroups_2024-Update
Glyma.08G161500 No alias Myosin family protein with Dil domain 0.03 Orthogroups_2024-Update
Pp1s17_368V6 No alias myosin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016459 myosin complex IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0007265 Ras protein signal transduction IEP Predicted GO
BP GO:0007266 Rho protein signal transduction IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR002710 Dilute_dom 1584 1682
IPR001609 Myosin_head_motor_dom 63 719
IPR000048 IQ_motif_EF-hand-BS 831 850
IPR004009 Myosin_N 9 48
No external refs found!