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  5. Brara.H03090.1

Brara.H03090.1


Description : A1-class (Pepsin) protease


Gene families : OG_42_0000468 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H03090.1
Cluster HCAA Clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Brara.C02474.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.002G054900 No alias Eukaryotic aspartyl protease family protein 0.04 Orthogroups_2024-Update
Solyc01g080020 No alias Eukaryotic aspartyl protease family protein, putative... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 254 415
IPR032861 TAXi_N 45 216
No external refs found!