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  5. Brara.H03119.1

Brara.H03119.1


Description : alpha-class expansin


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H03119.1

Target Alias Description ECC score Gene Family Method Actions
78615 No alias expansin A7 0.03 Orthogroups_2024-Update
A4A49_04302 No alias expansin-a10 0.04 Orthogroups_2024-Update
A4A49_38718 No alias expansin-a7 0.03 Orthogroups_2024-Update
At2g39700 No alias Expansin-A4 [Source:UniProtKB/Swiss-Prot;Acc:O48818] 0.03 Orthogroups_2024-Update
At3g29030 No alias At3g29030 [Source:UniProtKB/TrEMBL;Acc:Q1ECM3] 0.05 Orthogroups_2024-Update
Bradi3g59460 No alias expansin A1 0.04 Orthogroups_2024-Update
Bradi5g04120 No alias expansin 11 0.03 Orthogroups_2024-Update
Brara.B01279.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.C02025.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.C02851.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Glyma.06G021700 No alias expansin 11 0.04 Orthogroups_2024-Update
Glyma.18G265400 No alias expansin A23 0.04 Orthogroups_2024-Update
HORVU3Hr1G034030.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Mp1g24230.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00040125-RA No alias (q40636|expa2_orysa : 389.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
PSME_00051817-RA No alias (at1g20190 : 379.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.016G097500 No alias expansin A4 0.04 Orthogroups_2024-Update
Sobic.004G121700.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.004G121900.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Sobic.004G238801.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 164 242
IPR009009 RlpA-like_DPBB 65 153
No external refs found!