1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I00017.1

Brara.I00017.1


Description : GRAS-type transcription factor


Gene families : OG_42_0001551 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001551_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00017.1
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
56382 No alias RGA-like 1 0.02 Orthogroups_2024-Update
Bradi3g50930 No alias GRAS family transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G037792 No alias GRAS family transcription factor 0.05 Orthogroups_2024-Update
GRMZM2G051785 No alias GRAS family transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G053510.1 No alias GRAS-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g44360 No alias scarecrow transcription factor family protein, putative,... 0.02 Orthogroups_2024-Update
LOC_Os06g01620 No alias scarecrow, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.004G291000.2 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Sopen08g027270 No alias GRAS domain family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 198 559
No external refs found!