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At2g28700


Description : AGAMOUS-like 46 [Source:UniProtKB/TrEMBL;Acc:F4IIT6]


Gene families : OG_42_0000774 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g28700
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Bradi1g46675 No alias MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.A03689.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.03G083700 No alias AGAMOUS-like 80 0.03 Orthogroups_2024-Update
Glyma.11G160200 No alias AGAMOUS-like 80 0.03 Orthogroups_2024-Update
Glyma.11G186100 No alias AGAMOUS-like 80 0.05 Orthogroups_2024-Update
LOC_Os03g38610 No alias OsMADS87 - MADS-box family gene with M-gamma type-box, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 11 50
No external refs found!