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  5. Brara.I00045.1

Brara.I00045.1


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0001898 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001898_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00045.1
Cluster HCAA Clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Brara.C02892.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Cre11.g468383 No alias F-box family protein 0.02 Orthogroups_2024-Update
Mp4g09710.1 No alias F-box protein At4g00755 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.014G076300 No alias F-box family protein 0.04 Orthogroups_2024-Update
Pp1s98_185V6 No alias T18A10.29; F-box family protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006382 adenosine to inosine editing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0016553 base conversion or substitution editing IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 13 50
No external refs found!