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Description : component *(uL5c) of large plastid ribosomal-subunit proteome
Gene families : OG_42_0007175 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007175_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.I00052.1 | |
| Cluster | HCAA Clusters: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 6364 | No alias | Ribosomal L5P family protein | 0.07 | Orthogroups_2024-Update | |
| A4A49_10471 | No alias | 50s ribosomal protein l5, chloroplastic | 0.08 | Orthogroups_2024-Update | |
| At4g01310 | No alias | 50S ribosomal protein L5, chloroplastic... | 0.02 | Orthogroups_2024-Update | |
| Bradi1g76880 | No alias | Ribosomal L5P family protein | 0.08 | Orthogroups_2024-Update | |
| GRMZM2G119471 | No alias | Ribosomal L5P family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G255500 | No alias | Ribosomal L5P family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G237400 | No alias | Ribosomal L5P family protein | 0.04 | Orthogroups_2024-Update | |
| HORVU4Hr1G084410.1 | No alias | component *(uL5c) of large plastid ribosomal-subunit proteome | 0.06 | Orthogroups_2024-Update | |
| Kfl00083_0030 | kfl00083_0030_v1.1 | (q9muu5|rk5_mesvi : 236.0) Chloroplast 50S ribosomal... | 0.04 | Orthogroups_2024-Update | |
| Potri.002G154600 | No alias | Ribosomal L5P family protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s21_61V6 | No alias | ribosomal protein l5 | 0.05 | Orthogroups_2024-Update | |
| Pp1s358_49V6 | No alias | 50s ribosomal protein l5 | 0.03 | Orthogroups_2024-Update | |
| Seita.9G559300.1 | No alias | component *(uL5c) of large plastid ribosomal-subunit proteome | 0.06 | Orthogroups_2024-Update | |
| Sobic.001G524900.1 | No alias | component *(uL5c) of large plastid ribosomal-subunit proteome | 0.05 | Orthogroups_2024-Update | |
| Sopen09g002430 | No alias | ribosomal L5P family C-terminus | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| CC | GO:0005575 | cellular_component | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| No external refs found! |