- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : circadian clock factor *(REVEILLE) & transcription factor *(REVEILLE)
Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.I00054.1 | |
| Cluster | HCAA Clusters: Cluster_207 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_01132 | No alias | protein reveille 8 | 0.05 | Orthogroups_2024-Update | |
| At1g18330 | No alias | Protein REVEILLE 7 [Source:UniProtKB/Swiss-Prot;Acc:B3H5A8] | 0.04 | Orthogroups_2024-Update | |
| At2g46830 | No alias | Protein CCA1 [Source:UniProtKB/Swiss-Prot;Acc:P92973] | 0.03 | Orthogroups_2024-Update | |
| At5g02840 | No alias | LCL1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Z5] | 0.03 | Orthogroups_2024-Update | |
| Bradi1g29680 | No alias | Homeodomain-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.B00704.1 | No alias | transcription factor *(REVEILLE) | 0.03 | Orthogroups_2024-Update | |
| Brara.E03078.1 | No alias | circadian clock factor *(REVEILLE) & transcription... | 0.03 | Orthogroups_2024-Update | |
| Cre12.g514400 | No alias | circadian clock associated 1 | 0.01 | Orthogroups_2024-Update | |
| Glyma.09G167900 | No alias | Homeodomain-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.10G048500 | No alias | Homeodomain-like superfamily protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.18G044200 | No alias | Homeodomain-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G025030.1 | No alias | transcription factor *(REVEILLE) | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G001830.3 | No alias | circadian clock factor *(REVEILLE) & transcription... | 0.03 | Orthogroups_2024-Update | |
| LOC_Os06g51260 | No alias | MYB family transcription factor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| Mp2g14310.1 | No alias | transcription factor (MYB-related). REVEILLE circadian... | 0.03 | Orthogroups_2024-Update | |
| Potri.015G030400 | No alias | Homeodomain-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s325_68V6 | No alias | lhy protein | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G143100.2 | No alias | transcription factor *(REVEILLE) | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G281800.1 | No alias | circadian clock factor *(REVEILLE) & transcription... | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G223700.1 | No alias | circadian clock factor *(REVEILLE) & transcription... | 0.01 | Orthogroups_2024-Update | |
| Sobic.010G275700.1 | No alias | transcription factor *(REVEILLE) | 0.02 | Orthogroups_2024-Update | |
| Solyc01g095030 | No alias | Myb family transcription factor family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g098320 | No alias | Myb transcription factor (AHRD V3.3 *** A0A072UBN0_MEDTR) | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_2051.36 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_2286.17 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_3551.3 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004096 | catalase activity | IEP | Predicted GO |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Predicted GO |
| MF | GO:0004506 | squalene monooxygenase activity | IEP | Predicted GO |
| MF | GO:0004564 | beta-fructofuranosidase activity | IEP | Predicted GO |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | Predicted GO |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Predicted GO |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015696 | ammonium transport | IEP | Predicted GO |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Predicted GO |
| BP | GO:0015996 | chlorophyll catabolic process | IEP | Predicted GO |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Predicted GO |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Predicted GO |
| MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Predicted GO |
| BP | GO:0033015 | tetrapyrrole catabolic process | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Predicted GO |
| BP | GO:0046149 | pigment catabolic process | IEP | Predicted GO |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Predicted GO |
| MF | GO:0047746 | chlorophyllase activity | IEP | Predicted GO |
| BP | GO:0051187 | cofactor catabolic process | IEP | Predicted GO |
| BP | GO:0072488 | ammonium transmembrane transport | IEP | Predicted GO |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 67 | 112 |
| No external refs found! |