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  5. Brara.I00069.1

Brara.I00069.1


Description : R3-MYB transcription factor


Gene families : OG_42_0002018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00069.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
A4A49_00194 No alias histone h3-like centromeric protein htr12 0.03 Orthogroups_2024-Update
A4A49_25233 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Brara.A01768.1 No alias R3-MYB transcription factor 0.05 Orthogroups_2024-Update
Brara.C02876.1 No alias R3-MYB transcription factor 0.03 Orthogroups_2024-Update
Brara.D02795.1 No alias R3-MYB transcription factor 0.04 Orthogroups_2024-Update
Brara.I05606.1 No alias R3-MYB transcription factor 0.04 Orthogroups_2024-Update
MA_2008g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 35 73
No external refs found!