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  5. Brara.I00126.1

Brara.I00126.1


Description : E3 ubiquitin ligase


Gene families : OG_42_0000370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00126.1
Cluster HCAA Clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Bradi2g57520 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update
Brara.F02111.1 No alias E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
GRMZM2G028779 No alias Function unknown 0.04 Orthogroups_2024-Update
Seita.5G026700.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 21 66
IPR022143 DUF3675 111 174
No external refs found!