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  5. Brara.I00133.1

Brara.I00133.1


Description : component *(eL19) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00133.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
271656 No alias Ribosomal protein L19e family protein 0.13 Orthogroups_2024-Update
A4A49_20584 No alias 60s ribosomal protein l19-2 0.03 Orthogroups_2024-Update
A4A49_58465 No alias 60s ribosomal protein l19-2 0.09 Orthogroups_2024-Update
Bradi1g17920 No alias Ribosomal protein L19e family protein 0.15 Orthogroups_2024-Update
Bradi1g63010 No alias Ribosomal protein L19e family protein 0.14 Orthogroups_2024-Update
Brara.I05560.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Cre02.g075700 No alias Ribosomal protein L19e family protein 0.16 Orthogroups_2024-Update
GRMZM2G116135 No alias Ribosomal protein L19e family protein 0.07 Orthogroups_2024-Update
Glyma.02G016000 No alias Ribosomal protein L19e family protein 0.11 Orthogroups_2024-Update
Glyma.03G211000 No alias Ribosomal protein L19e family protein 0.03 Orthogroups_2024-Update
Glyma.19G213200 No alias Ribosomal protein L19e family protein 0.09 Orthogroups_2024-Update
HORVU2Hr1G018700.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
HORVU4Hr1G049670.2 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Kfl00915_0030 kfl00915_0030_v1.1 (at1g02780 : 290.0) embryo defective 2386 (emb2386);... 0.04 Orthogroups_2024-Update
MA_1839g0010 No alias (at1g02780 : 287.0) embryo defective 2386 (emb2386);... 0.07 Orthogroups_2024-Update
MA_22977g0010 No alias (at1g02780 : 282.0) embryo defective 2386 (emb2386);... 0.08 Orthogroups_2024-Update
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.1 Orthogroups_2024-Update
PSME_00044681-RA No alias (at3g16780 : 285.0) Ribosomal protein L19e family... 0.05 Orthogroups_2024-Update
Potri.012G037500 No alias Ribosomal protein L19e family protein 0.05 Orthogroups_2024-Update
Pp1s121_144V6 No alias 60s ribosomal protein 0.2 Orthogroups_2024-Update
Pp1s144_37V6 No alias ribosomal protein l19 0.15 Orthogroups_2024-Update
Pp1s235_118V6 No alias 60s ribosomal protein 0.11 Orthogroups_2024-Update
Pp1s302_25V6 No alias ribosomal protein l19 0.07 Orthogroups_2024-Update
Pp1s3_375V6 No alias 60s ribosomal protein l19-3 0.15 Orthogroups_2024-Update
Pp1s50_102V6 No alias 60s ribosomal protein l19-3 0.14 Orthogroups_2024-Update
Pp1s83_173V6 No alias 60s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s83_174V6 No alias 60s ribosomal protein 0.04 Orthogroups_2024-Update
Seita.4G043900.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.21 Orthogroups_2024-Update
Sobic.003G196800.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.004G045300.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Sobic.010G069400.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.17 Orthogroups_2024-Update
Solyc06g009210 No alias Ribosomal protein L19 (AHRD V3.3 *** K4C3V1_SOLLC) 0.1 Orthogroups_2024-Update
Solyc09g075430 No alias Ribosomal protein L19 (AHRD V3.3 *** K4CVC0_SOLLC) 0.1 Orthogroups_2024-Update
Sopen06g003980 No alias Ribosomal protein L19e 0.05 Orthogroups_2024-Update
Sopen09g030210 No alias Ribosomal protein L19e 0.09 Orthogroups_2024-Update
evm.model.contig_735.3 No alias (at3g16780 : 205.0) Ribosomal protein L19e family... 0.08 Orthogroups_2024-Update
evm.model.tig00021181.1 No alias (at1g02780 : 206.0) embryo defective 2386 (emb2386);... 0.14 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 145
No external refs found!