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  5. Brara.I00136.1

Brara.I00136.1


Description : ppGpp hydrolase *(RSH1)


Gene families : OG_42_0005418 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00136.1
Cluster HCAA Clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
At4g02260 No alias RSH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K1] 0.05 Orthogroups_2024-Update
Sopen09g030160 No alias HD domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 378 494
IPR004095 TGS 565 624
No external refs found!