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  5. Brara.I00149.1

Brara.I00149.1


Description : Unknown function


Gene families : OG_42_0000796 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000796_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00149.1
Cluster HCAA Clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G016900 No alias Protein of unknown function, DUF538 0.03 Orthogroups_2024-Update
Glyma.03G215100 No alias Protein of unknown function, DUF538 0.03 Orthogroups_2024-Update
Glyma.10G017400 No alias Protein of unknown function, DUF538 0.04 Orthogroups_2024-Update
LOC_Os01g41220 No alias DUF538 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_131122g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_6141586g0010 No alias (at4g02360 : 115.0) Protein of unknown function, DUF538;... 0.03 Orthogroups_2024-Update
MA_77917g0010 No alias (at4g02370 : 116.0) Protein of unknown function, DUF538;... 0.04 Orthogroups_2024-Update
Potri.014G127500 No alias Protein of unknown function, DUF538 0.04 Orthogroups_2024-Update
Seita.7G276100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G082300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G088200.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007493 DUF538 1 80
No external refs found!