1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I00210.1

Brara.I00210.1


Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00210.1
Cluster HCAA Clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
At3g26810 No alias AFB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VGF7] 0.03 Orthogroups_2024-Update
Brara.B03253.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.02 Orthogroups_2024-Update
GRMZM2G137451 No alias auxin signaling F-box 2 0.07 Orthogroups_2024-Update
Glyma.02G211800 No alias auxin F-box protein 5 0.03 Orthogroups_2024-Update
Glyma.08G059500 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Mp6g02750.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 476 492
No external refs found!