1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I00217.1

Brara.I00217.1


Description : regulatory protein *(CYCD) of cell cycle


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00217.1
Cluster HCAA Clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G212400 No alias Cyclin D2;1 0.03 Orthogroups_2024-Update
MA_17738g0010 No alias (at3g50070 : 241.0) Encode CYCD3;3, a CYCD3 D-type... 0.03 Orthogroups_2024-Update
MA_93221g0010 No alias (at1g70210 : 231.0) Encodes a D-type cyclin that... 0.02 Orthogroups_2024-Update
Mp1g24670.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
PSME_00001479-RA No alias (at4g34160 : 239.0) encodes a cyclin D-type protein... 0.05 Orthogroups_2024-Update
PSME_00005614-RA No alias (at4g34160 : 209.0) encodes a cyclin D-type protein... 0.03 Orthogroups_2024-Update
Pp1s24_216V6 No alias cyclin delta-2 0.02 Orthogroups_2024-Update
Solyc01g107730 No alias D-type cyclin-2 0.02 Orthogroups_2024-Update
Solyc03g006670 No alias cyclinD6_2 0.03 Orthogroups_2024-Update
Solyc04g078470 No alias D-type cyclin-3 0.02 Orthogroups_2024-Update
evm.model.contig_2077.9 No alias (at1g80370 : 173.0) Cyclin A2;4 (CYCA2;4); CONTAINS... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
BP GO:0016126 sterol biosynthetic process IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 154 258
IPR006671 Cyclin_N 30 151
No external refs found!