Brara.I00232.1


Description : Unknown function


Gene families : OG_42_0000213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00232.1
Cluster HCAA Clusters: Cluster_398

Target Alias Description ECC score Gene Family Method Actions
A4A49_12663 No alias casparian strip membrane protein 2 0.05 Orthogroups_2024-Update
A4A49_22807 No alias casparian strip membrane protein 2 0.05 Orthogroups_2024-Update
At2g27370 No alias Casparian strip membrane protein 3... 0.03 Orthogroups_2024-Update
At3g06390 No alias CASP-like protein 1D2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQU2] 0.04 Orthogroups_2024-Update
At4g20390 No alias CASP-like protein 1B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP0] 0.04 Orthogroups_2024-Update
Brara.F03733.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Glyma.07G251200 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Glyma.15G191800 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
LOC_Os07g26110 No alias membrane associated DUF588 domain containing protein,... 0.03 Orthogroups_2024-Update
Solyc09g010200 No alias CASP-like protein (AHRD V3.3 *** K4CR48_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006702 CASP_dom 7 143
No external refs found!