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At2g28950


Description : EXPA6 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL6]


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g28950
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
102623 No alias expansin A15 0.03 Orthogroups_2024-Update
143857 No alias expansin A4 0.04 Orthogroups_2024-Update
179212 No alias expansin A15 0.03 Orthogroups_2024-Update
231226 No alias expansin A9 0.02 Orthogroups_2024-Update
409954 No alias expansin A8 0.02 Orthogroups_2024-Update
419575 No alias expansin A16 0.03 Orthogroups_2024-Update
91129 No alias expansin A15 0.02 Orthogroups_2024-Update
Brara.K00806.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
GRMZM2G339122 No alias expansin A1 0.03 Orthogroups_2024-Update
MA_37884g0010 No alias (q40636|expa2_orysa : 400.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
Mp3g10160.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00000399-RA No alias (q7xud0|exp10_orysa : 316.0) Expansin-A10 precursor... 0.03 Orthogroups_2024-Update
PSME_00009799-RA No alias (at1g26770 : 387.0) Encodes an expansin. Naming... 0.03 Orthogroups_2024-Update
PSME_00045415-RA No alias (at4g01630 : 291.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.008G088300 No alias expansin A1 0.03 Orthogroups_2024-Update
Potri.013G154700 No alias expansin A8 0.03 Orthogroups_2024-Update
Seita.5G044100.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Solyc09g018020 No alias Expansin (AHRD V3.3 *** G4XZW3_9GENT) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
BP GO:0006897 endocytosis IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 66 152
IPR007117 Expansin_CBD 164 241
No external refs found!