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  5. Brara.I00274.1

Brara.I00274.1


Description : Unknown function


Gene families : OG_42_0000317 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00274.1
Cluster HCAA Clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
At1g46912 No alias F-box associated ubiquitination effector family protein... 0.03 Orthogroups_2024-Update
At1g47765 No alias Putative F-box protein At1g47765... 0.03 Orthogroups_2024-Update
At2g19630 No alias Putative F-box protein At2g19630... 0.03 Orthogroups_2024-Update
At2g31470 No alias F-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3] 0.06 Orthogroups_2024-Update
At3g56670 No alias Probable F-box protein At3g56670... 0.03 Orthogroups_2024-Update
At4g38870 No alias Putative F-box protein At4g38870... 0.04 Orthogroups_2024-Update
At5g18160 No alias F-box protein At5g18160 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK54] 0.03 Orthogroups_2024-Update
Brara.C00981.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.F02195.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.J00273.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.02G128400 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 9 47
IPR013187 F-box-assoc_dom_typ3 204 334
No external refs found!