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Description : AS2/LOB-type transcription factor
Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.I00295.1 | |
| Cluster | HCAA Clusters: Cluster_206 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_03191 | No alias | lob domain-containing protein 15 | 0.02 | Orthogroups_2024-Update | |
| At2g30130 | No alias | PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1] | 0.03 | Orthogroups_2024-Update | |
| At2g40470 | No alias | LOB domain-containing protein 15... | 0.06 | Orthogroups_2024-Update | |
| At3g27650 | No alias | LOB domain-containing protein 25... | 0.07 | Orthogroups_2024-Update | |
| Bradi1g65760 | No alias | LOB domain-containing protein 1 | 0.03 | Orthogroups_2024-Update | |
| Brara.E01292.1 | No alias | AS2/LOB-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.F02209.1 | No alias | AS2/LOB-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G234600 | No alias | LOB domain-containing protein 13 | 0.04 | Orthogroups_2024-Update | |
| Glyma.05G040500 | No alias | Lateral organ boundaries (LOB) domain family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.10G213500 | No alias | LOB domain-containing protein 1 | 0.04 | Orthogroups_2024-Update | |
| Glyma.14G202300 | No alias | LOB domain-containing protein 13 | 0.05 | Orthogroups_2024-Update | |
| Glyma.15G045200 | No alias | LOB domain-containing protein 11 | 0.03 | Orthogroups_2024-Update | |
| Glyma.20G023400 | No alias | LOB domain-containing protein 4 | 0.04 | Orthogroups_2024-Update | |
| HORVU3Hr1G016690.1 | No alias | AS2/LOB-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| LOC_Os08g31080 | No alias | DUF260 domain containing protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_84752g0010 | No alias | (at2g40470 : 201.0) LOB domain-containing protein 15... | 0.03 | Orthogroups_2024-Update | |
| PSME_00045603-RA | No alias | (at2g40470 : 164.0) LOB domain-containing protein 15... | 0.02 | Orthogroups_2024-Update | |
| PSME_00050292-RA | No alias | (at2g40470 : 177.0) LOB domain-containing protein 15... | 0.04 | Orthogroups_2024-Update | |
| Potri.001G281600 | No alias | Lateral organ boundaries (LOB) domain family protein | 0.03 | Orthogroups_2024-Update | |
| Potri.005G134900 | No alias | ASYMMETRIC LEAVES 2-like 1 | 0.02 | Orthogroups_2024-Update | |
| Pp1s170_93V6 | No alias | MDC12.5; lateral organ boundaries (LOB) protein... | 0.03 | Orthogroups_2024-Update | |
| Seita.8G019200.1 | No alias | AS2/LOB-type transcription factor | 0.05 | Orthogroups_2024-Update | |
| Sobic.008G005000.1 | No alias | AS2/LOB-type transcription factor | 0.04 | Orthogroups_2024-Update | |
| Solyc02g090410 | No alias | ASYMMETRIC LEAVES 2-like 1 (AHRD V3.3 *** A0A061DMY0_THECC) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| MF | GO:0008146 | sulfotransferase activity | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 12 | 108 |
| No external refs found! |