1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I00449.1

Brara.I00449.1


Description : clade E phosphatase


Gene families : OG_42_0000218 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00449.1
Cluster HCAA Clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
A4A49_06586 No alias putative protein phosphatase 2c 34 0.03 Orthogroups_2024-Update
Bradi3g43360 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Brara.A03707.1 No alias clade E phosphatase 0.04 Orthogroups_2024-Update
Brara.C03004.1 No alias clade E phosphatase 0.05 Orthogroups_2024-Update
Glyma.07G244700 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G059140.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.004G066200 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Potri.006G105000 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Seita.6G199600.1 No alias clade E phosphatase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 87 334
No external refs found!