1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I00517.1

Brara.I00517.1


Description : solute transporter *(MTCC)


Gene families : OG_42_0001006 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00517.1
Cluster HCAA Clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Bradi1g08301 No alias Mitochondrial substrate carrier family protein 0.02 Orthogroups_2024-Update
Bradi1g72940 No alias Mitochondrial substrate carrier family protein 0.04 Orthogroups_2024-Update
LOC_Os10g25830 No alias mitochondrial carrier protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.5G156700.1 No alias solute transporter *(MTCC) 0.03 Orthogroups_2024-Update
Seita.9G254900.1 No alias solute transporter *(MTCC) 0.02 Orthogroups_2024-Update
Sobic.001G085900.3 No alias solute transporter *(MTCC) 0.03 Orthogroups_2024-Update
Sobic.003G153300.1 No alias solute transporter *(MTCC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 138 226
IPR018108 Mitochondrial_sb/sol_carrier 238 331
IPR018108 Mitochondrial_sb/sol_carrier 47 120
No external refs found!