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  5. Brara.I00534.1

Brara.I00534.1


Description : Unknown function


Gene families : OG_42_0005701 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00534.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G038200 No alias protein kinase family protein 0.04 Orthogroups_2024-Update
LOC_Os01g12810 No alias retrotransposon protein, putative, unclassified, expressed 0.04 Orthogroups_2024-Update
Sopen07g016320 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen08g022090 No alias PPR repeat family 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 259 288
IPR002885 Pentatricopeptide_repeat 115 162
IPR002885 Pentatricopeptide_repeat 393 437
IPR002885 Pentatricopeptide_repeat 326 373
IPR002885 Pentatricopeptide_repeat 188 233
No external refs found!