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  5. Brara.I00553.1

Brara.I00553.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00553.1
Cluster HCAA Clusters: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14810 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Brara.D02576.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Brara.J02267.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G101800 No alias zinc-finger protein 10 0.04 Orthogroups_2024-Update
Glyma.02G029400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G127600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G059500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G117800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os02g57550 No alias ZOS2-18 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g20930 No alias ZOS5-07 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g05900 No alias ZOS7-02 - C2H2 zinc finger protein, expressed 0.04 Orthogroups_2024-Update
MA_57501g0010 No alias (at5g25160 : 119.0) Encodes a zinc finger protein... 0.05 Orthogroups_2024-Update
Potri.002G041700 No alias zinc finger protein 11 0.03 Orthogroups_2024-Update
Seita.9G170900.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G441500.2 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G037000.2 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G037300.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Solyc01g005130 No alias Zinc finger protein, putative (AHRD V3.3 *** B9SNH3_RICCO) 0.03 Orthogroups_2024-Update
Solyc10g078970 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!