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  5. Brara.I00558.1

Brara.I00558.1


Description : Unknown function


Gene families : OG_42_0000357 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00558.1
Cluster HCAA Clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Brara.G01642.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU7Hr1G098100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00346_0080 kfl00346_0080_v1.1 (at5g35180 : 423.0) FUNCTIONS IN: phosphoinositide... 0.01 Orthogroups_2024-Update
LOC_Os06g48320 No alias EDR2, putative, expressed 0.02 Orthogroups_2024-Update
Seita.2G420300.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predicted GO
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007029 endoplasmic reticulum organization IEP Predicted GO
BP GO:0007033 vacuole organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1905037 autophagosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR009769 EDR2_C 49 262
No external refs found!