Brara.I00633.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00633.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
A4A49_12312 No alias dof zinc finger protein dof2.1 0.03 Orthogroups_2024-Update
A4A49_20555 No alias dof zinc finger protein dof2.1 0.03 Orthogroups_2024-Update
A4A49_24184 No alias dof zinc finger protein dof3.1 0.03 Orthogroups_2024-Update
A4A49_33562 No alias dof zinc finger protein dof4.6 0.03 Orthogroups_2024-Update
At1g26790 No alias Dof-type zinc finger DNA-binding family protein... 0.03 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Brara.A01411.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.D00083.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.I02955.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G064655 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
GRMZM2G327189 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.04G239500 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.08G228900 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
Glyma.18G260500 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
HORVU2Hr1G047750.4 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g15900 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os01g55340 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g15350 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g45200 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g47810 No alias dof zinc finger domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g29960 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_175298g0010 No alias (at5g39660 : 214.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
MA_18267g0010 No alias (at5g62940 : 141.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
Mp2g20790.1 No alias transcription factor (DOF) 0.02 Orthogroups_2024-Update
PSME_00004776-RA No alias (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... 0.02 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
PSME_00040668-RA No alias (at5g02460 : 137.0) Dof-type zinc finger DNA-binding... 0.03 Orthogroups_2024-Update
Potri.004G056900 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Pp1s26_282V6 No alias zinc finger 0.04 Orthogroups_2024-Update
Pp1s385_53V6 No alias ascorbate oxidase promoter-binding protein aobp 0.02 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.001G420300.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.003G033500.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g076850 No alias Dof zinc finger protein4 0.02 Orthogroups_2024-Update
Sopen02g015430 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen02g022800 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen10g005150 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0042575 DNA polymerase complex IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:0043625 delta DNA polymerase complex IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 48 104
No external refs found!