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  5. Brara.I00640.1

Brara.I00640.1


Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00640.1
Cluster HCAA Clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
A4A49_15736 No alias protein cobra 0.06 Orthogroups_2024-Update
At5g15630 No alias COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3] 0.03 Orthogroups_2024-Update
Bradi1g08310 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.04G160100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.06G205400 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
Glyma.19G033600 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
LOC_Os05g32110 No alias COBRA, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g41320 No alias COBRA-like protein precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_106654g0010 No alias (at5g60920 : 706.0) Encodes a... 0.03 Orthogroups_2024-Update
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Orthogroups_2024-Update
PSME_00044523-RA No alias (q60e70|cobl3_orysa : 712.0) COBRA-like 3 protein... 0.03 Orthogroups_2024-Update
Pp1s44_119V6 No alias protein cobra 0.03 Orthogroups_2024-Update
Solyc02g065770 No alias COBRA protein (AHRD V3.3 *** K4B708_SOLLC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019902 phosphatase binding IEP Predicted GO
MF GO:0019903 protein phosphatase binding IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!