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  5. Brara.I00647.1

Brara.I00647.1


Description : class-II histone deacetylase


Gene families : OG_42_0002158 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00647.1
Cluster HCAA Clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G066760.2 No alias class-II histone deacetylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004730 pseudouridylate synthase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 37 336
No external refs found!