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  5. Brara.I00678.1

Brara.I00678.1


Description : Unknown function


Gene families : OG_42_0001335 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00678.1
Cluster HCAA Clusters: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
A4A49_11394 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.A01540.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.07G079600 No alias peptidoglycan-binding LysM domain-containing protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G048920.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Potri.002G152600 No alias peptidoglycan-binding LysM domain-containing protein 0.05 Orthogroups_2024-Update
Potri.010G231000 No alias peptidoglycan-binding LysM domain-containing protein 0.03 Orthogroups_2024-Update
Potri.014G077900 No alias peptidoglycan-binding LysM domain-containing protein 0.03 Orthogroups_2024-Update
Solyc03g026370 No alias LOW QUALITY:Peptidoglycan-binding LysM domain-containing... 0.04 Orthogroups_2024-Update
Solyc10g083410 No alias LOW QUALITY:Peptidoglycan-binding LysM domain protein... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!