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  5. Brara.I00690.1

Brara.I00690.1


Description : MYB class-R2R3 subgroup-1 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00690.1
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Bradi3g18977 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.03 Orthogroups_2024-Update
Brara.B00461.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Glyma.02G009800 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.03G163100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.04G004100 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.05G234600 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Glyma.09G261600 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.11G142900 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.12G104800 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.16G063700 No alias myb domain protein 40 0.05 Orthogroups_2024-Update
Glyma.20G158100 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
LOC_Os02g42870 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g43580 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33150 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g37970 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_139238g0010 No alias (at1g09540 : 266.0) Encodes putative transcription... 0.03 Orthogroups_2024-Update
PSME_00017280-RA No alias (at1g22640 : 187.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00023733-RA No alias (at1g22640 : 175.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00052407-RA No alias (at4g09460 : 211.0) Encodes myb6 DNA-binding protein.;... 0.03 Orthogroups_2024-Update
Potri.005G001600 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Potri.008G081600 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Pp1s106_216V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.02 Orthogroups_2024-Update
Seita.2G200200.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G219800.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G148100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc03g116100 No alias R2R3MYB transcription factor 31 0.03 Orthogroups_2024-Update
Sopen04g006600 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!