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  5. Brara.I00775.1

Brara.I00775.1


Description : substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00775.1
Cluster HCAA Clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
A4A49_24985 No alias root phototropism protein 2 0.04 Orthogroups_2024-Update
Brara.G01164.1 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 Orthogroups_2024-Update
Brara.I03328.1 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.05 Orthogroups_2024-Update
GRMZM5G812926 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.02G039400 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G093850.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g52880 No alias BTBN9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.03 Orthogroups_2024-Update
MA_14938g0020 No alias (at5g48130 : 265.0) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
Seita.1G203400.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Solyc07g043130 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 254 571
No external refs found!