1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I00828.1

Brara.I00828.1


Description : transcriptional repressor *(IAA/AUX)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00828.1
Cluster HCAA Clusters: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
A4A49_25171 No alias auxin-induced protein aux22 0.03 Orthogroups_2024-Update
A4A49_42392 No alias auxin-responsive protein iaa27 0.03 Orthogroups_2024-Update
At1g04100 No alias Auxin-responsive protein IAA10... 0.02 Orthogroups_2024-Update
At2g33310 No alias Auxin-responsive protein IAA13... 0.04 Orthogroups_2024-Update
Bradi1g36930 No alias indole-3-acetic acid inducible 14 0.03 Orthogroups_2024-Update
Bradi2g04910 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Bradi2g05650 No alias phytochrome-associated protein 1 0.04 Orthogroups_2024-Update
Bradi2g34030 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Brara.A02683.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.A03753.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.C01700.1 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update
Brara.C03574.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.E01959.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.E02585.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.I04920.1 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update
HORVU3Hr1G062160.2 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
HORVU3Hr1G088810.2 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
HORVU7Hr1G084940.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Potri.001G190300 No alias phytochrome-associated protein 1 0.03 Orthogroups_2024-Update
Seita.9G054500.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Seita.9G162900.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Sopen01g040960 No alias AUX/IAA family 0.02 Orthogroups_2024-Update
Sopen03g039380 No alias AUX/IAA family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004860 protein kinase inhibitor activity IEP Predicted GO
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019210 kinase inhibitor activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 63 300
No external refs found!