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  5. Brara.I00847.1

Brara.I00847.1


Description : AS2/LOB-type transcription factor


Gene families : OG_42_0000544 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00847.1
Cluster HCAA Clusters: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
A4A49_24450 No alias lob domain-containing protein 37 0.03 Orthogroups_2024-Update
A4A49_28915 No alias lob domain-containing protein 37 0.03 Orthogroups_2024-Update
A4A49_31231 No alias lob domain-containing protein 41 0.02 Orthogroups_2024-Update
Brara.C02994.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
PSME_00026677-RA No alias (at1g67100 : 203.0) LOB domain-containing protein 40... 0.04 Orthogroups_2024-Update
PSME_00041119-RA No alias (at5g67420 : 212.0) LOB domain-containing protein 37... 0.04 Orthogroups_2024-Update
Sobic.001G169200.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Sopen01g049450 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!