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  5. Brara.I00861.1

Brara.I00861.1


Description : subgroup ERF-II-DEAR transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00861.1
Cluster HCAA Clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
A4A49_13998 No alias ethylene-responsive transcription factor 4 0.05 Orthogroups_2024-Update
A4A49_16759 No alias ethylene-responsive transcription factor erf012 0.02 Orthogroups_2024-Update
A4A49_20932 No alias ethylene-responsive transcription factor erf114 0.05 Orthogroups_2024-Update
A4A49_38093 No alias ethylene-responsive transcription factor erf034 0.03 Orthogroups_2024-Update
A4A49_40092 No alias ethylene-responsive transcription factor crf2 0.03 Orthogroups_2024-Update
At1g12610 No alias Dehydration-responsive element-binding protein 1F... 0.06 Orthogroups_2024-Update
At1g28370 No alias ERF domain protein 11 [Source:TAIR;Acc:AT1G28370] 0.02 Orthogroups_2024-Update
At2g46310 No alias Ethylene-responsive transcription factor CRF5... 0.06 Orthogroups_2024-Update
At4g11140 No alias Ethylene-responsive transcription factor CRF1... 0.04 Orthogroups_2024-Update
At5g51990 No alias C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26] 0.04 Orthogroups_2024-Update
At5g61890 No alias Ethylene-responsive transcription factor ERF114... 0.02 Orthogroups_2024-Update
Bradi3g06562 No alias ethylene responsive element binding factor 3 0.03 Orthogroups_2024-Update
Cre14.g620500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G434203 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G138900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G015900 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.07G017300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G118900 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G053600 No alias DREB and EAR motif protein 2 0.03 Orthogroups_2024-Update
Glyma.13G236500 No alias erf domain protein 9 0.03 Orthogroups_2024-Update
Glyma.19G026000 No alias related to AP2 11 0.05 Orthogroups_2024-Update
Glyma.19G035500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
MA_10031781g0010 No alias (at5g51190 : 100.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.07 Orthogroups_2024-Update
PSME_00041851-RA No alias (at1g21910 : 102.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.006G138900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G115600 No alias ethylene responsive element binding factor 4 0.07 Orthogroups_2024-Update
Potri.T050600 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Pp1s117_32V6 No alias ap2 domain transcription factor 0.03 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.06 Orthogroups_2024-Update
Seita.1G259200.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.1G323500.1 No alias subgroup ERF-I transcription factor 0.05 Orthogroups_2024-Update
Seita.5G320400.1 No alias subgroup ERF-IX transcription factor 0.06 Orthogroups_2024-Update
Seita.5G348000.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Seita.7G188500.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G169400.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Sobic.001G481600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G260800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G350500.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.04 Orthogroups_2024-Update
Sobic.004G158901.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G227400.2 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G168100.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sopen03g005150 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen07g024840 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen10g030870 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 22 70
No external refs found!