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  5. Brara.I00982.1

Brara.I00982.1


Description : calcium sensor *(CML)


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00982.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Brara.H02086.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Glyma.01G185600 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Glyma.11G056500 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Glyma.11G217200 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Glyma.18G039500 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
MA_456498g0010 No alias (at1g24620 : 152.0) EF hand calcium-binding protein... 0.02 Orthogroups_2024-Update
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Orthogroups_2024-Update
Pp1s107_173V6 No alias polcalcin jun o 2 0.02 Orthogroups_2024-Update
Pp1s263_50V6 No alias polcalcin 0.02 Orthogroups_2024-Update
Pp1s56_122V6 No alias polcalcin jun 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Predicted GO
MF GO:0001067 regulatory region nucleic acid binding IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009439 cyanate metabolic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
MF GO:0032422 purine-rich negative regulatory element binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0044212 transcription regulatory region DNA binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 121 182
IPR002048 EF_hand_dom 50 109
No external refs found!