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  5. Brara.I01184.1

Brara.I01184.1


Description : Unknown function


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01184.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At1g12210 No alias Disease resistance protein RFL1... 0.03 Orthogroups_2024-Update
At1g52660 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
At1g63350 No alias Disease resistance protein (CC-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At4g27190 No alias Disease resistance protein At4g27190... 0.03 Orthogroups_2024-Update
At4g27220 No alias NB-ARC domain-containing disease resistance protein... 0.05 Orthogroups_2024-Update
At5g43740 No alias Probable disease resistance protein At5g43740... 0.04 Orthogroups_2024-Update
Brara.I01920.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.K00645.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G032602 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.18G280366 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
LOC_Os01g57870 No alias disease resistance protein RPS2, putative, expressed 0.03 Orthogroups_2024-Update
MA_20587g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_53162g0020 No alias (at5g43740 : 114.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_8325275g0010 No alias (at1g12220 : 93.2) Resistance gene, mediates resistance... 0.05 Orthogroups_2024-Update
MA_9234097g0010 No alias (at1g61190 : 91.3) LRR and NB-ARC domains-containing... 0.02 Orthogroups_2024-Update
PSME_00026298-RA No alias (at5g43730 : 122.0) Disease resistance protein... 0.01 Orthogroups_2024-Update
PSME_00027915-RA No alias (at1g15890 : 191.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00030472-RA No alias (at1g15890 : 234.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00033120-RA No alias (at1g63350 : 267.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00053103-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00053148-RA No alias (at1g12210 : 218.0) RFL1 has high sequence similarity to... 0.03 Orthogroups_2024-Update
Potri.011G124100 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Potri.T003800 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T013800 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T024900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T044500 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Potri.T045200 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T052600 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Seita.7G165200.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G435900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G146500.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 536 596
IPR002182 NB-ARC 160 401
No external refs found!