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  5. Brara.I01217.1

Brara.I01217.1


Description : E3 ubiquitin ligase *(RIE1)


Gene families : OG_42_0000431 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01217.1
Cluster HCAA Clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
At1g63170 No alias E3 ubiquitin-protein ligase At1g63170... 0.03 Orthogroups_2024-Update
At3g61180 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
Brara.H02643.1 No alias E3 ubiquitin ligase *(RIE1) 0.03 Orthogroups_2024-Update
Brara.I04212.1 No alias E3 ubiquitin ligase *(RIE1) 0.03 Orthogroups_2024-Update
GRMZM2G092244 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G124800 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.04 Orthogroups_2024-Update
LOC_Os07g27950 No alias RING zinc finger protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.1G345800.1 No alias E3 ubiquitin ligase *(DRR1) 0.03 Orthogroups_2024-Update
Seita.2G176000.1 No alias E3 ubiquitin ligase *(DRR1) 0.06 Orthogroups_2024-Update
Seita.3G104300.1 No alias E3 ubiquitin ligase *(DRR1) 0.03 Orthogroups_2024-Update
Sopen12g002900 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 286 318
No external refs found!