Description : component a *(SPO11) of meiotic topoisomerase-VI complex
Gene families : OG_42_0001606 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001606_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.I01270.1 | |
Cluster | HCAA Clusters: Cluster_64 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_39025 | No alias | dna topoisomerase 6 subunit a | 0.04 | Orthogroups_2024-Update | |
At3g13170 | No alias | Meiotic recombination protein SPO11-1... | 0.03 | Orthogroups_2024-Update | |
Brara.A03284.1 | No alias | component a *(SPO11) of meiotic topoisomerase-VI complex | 0.03 | Orthogroups_2024-Update | |
Potri.001G366700 | No alias | Spo11/DNA topoisomerase VI, subunit A protein | 0.03 | Orthogroups_2024-Update | |
Solyc07g065430 | No alias | No description available | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
MF | GO:0003824 | catalytic activity | IEA | 16Dec |
MF | GO:0005524 | ATP binding | IEA | 16Dec |
CC | GO:0005694 | chromosome | IEA | 16Dec |
BP | GO:0006259 | DNA metabolic process | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006308 | DNA catabolic process | IEP | Predicted GO |
BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
BP | GO:0009719 | response to endogenous stimulus | IEP | Predicted GO |
BP | GO:0009725 | response to hormone | IEP | Predicted GO |
BP | GO:0009733 | response to auxin | IEP | Predicted GO |
BP | GO:0010033 | response to organic substance | IEP | Predicted GO |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
BP | GO:0042221 | response to chemical | IEP | Predicted GO |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predicted GO |
MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013049 | Spo11/TopoVI_A_N | 92 | 157 |
No external refs found! |