Brara.I01342.1

Description : Unknown function

Gene families : OG_42_0000504 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000504_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I01342.1
Cluster	HCAA Clusters: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
At1g49920	No alias	MuDR family transposase [Source:UniProtKB/TrEMBL;Acc:Q9C702]	0.05	Orthogroups_2024-Update
Brara.D01167.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sopen02g035490	No alias	hypothetical protein	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	16Dec
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018289	MULE_transposase_dom	386	474
IPR007527	Znf_SWIM	632	664
IPR004332	Transposase_MuDR	192	256

External Links

No external refs found!