1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I01379.1

Brara.I01379.1


Description : CMF transcription factor


Gene families : OG_42_0000610 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000610_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01379.1
Cluster HCAA Clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
A4A49_23794 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Potri.001G136700 No alias activator of spomin::LUC2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0042586 peptide deformylase activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 187 229
No external refs found!